Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015812492.1_cds_XP_016497193.1_11342
CDS Infomation

[gene=LOC107816030] [db_xref=GeneID:107816030] [protein=receptor-like serine/threonine-protein kinase SD1-8 isoform X3] [protein_id=XP_016497193.1] [location=complement(join(41566..41862,41974..42124,42213..42447,42579..42795,42900..43054,43389..43544,44177..44971,45062..45342,47810..47811))] [gbkey=CDS]
Sequence

ATGGATGGCGAGACTTTAGTTTCGTCCAACCAAAGATTTGAAATGGGATTTTTTGGTTCT
ACTACACCATTTCGGCACACAAGGTACCTGGGATTGTGGTACAAGGGTATAGAGTCTGGT
ATAGTATGGGTTGGCAATAGATTGAATCCACTTGGACATGGTGCAAGGCTTGTATTCGAT
GTACAAGGATTCATTTTTCTCCAAGATGATACAGGAAAGAAGGTACCGATTTATACGCCA
AAACAGATTGTTCTCTTGCCAGTTTTGCAGCTCCTTGATGCAGAAATGAAGCTTGGTTGG
GACCCGAAAACTGGACTTAACCGAGCCATGAATTCCTGGAGGACAAGTGATGATCCAGCT
CCTGGTGAGTATTTCTTCAGGTTAGAGTCAGGTGAGTCAGGTCAGTCACTCCAACTAGTT
CTTGAGAAAAAACAGCAAAGAGCTTCAAGGTGGGGTCCTTGGGATGGACAAATATTCAGT
GGCGGTGATGCCCTCGTGGACGAGCTGGTACTCAGACCAGTATTTAACTCCAAAACTGGT
GCATTTTATGTTACATTTGAAGCCAAGAACGACAGCAGATTGAAACTGTCACTGAATCCA
GAGGGTAAGATACAGTTCCTGAAATGGACAAATGCCACTGGCTGGATTCAAGTGAAGGTC
CTGAATAAGGACATATGTGACAATTATAGGACTTGTGGGCCTTATGGAGTTTGTTTCGTT
GAGAATCCATCCTGCCGGTGTCCTGATGGTTTCACGGCTACATCACCAGATGACTGGGAC
AAGATGGATTATACCAACGGATGTAGGAGAATGACTCCTCTTAATTATACTGACAAAGAT
ATGTTTGTGAAGAATACTGGACTGAAGTTGCCTGATAATGCAACTTACTGGGGAATGTTG
TCCCCAGAGGAGTGTGGAGAGAAATGCTTGAATGAAAGATCGTGCATGGCTTATACTATC
ATCAATATCAACGGAAATGTCAGCAAATGTTTCGTTTGGTTGGGAGATTTACTTGATATG
AGACATTCGGAAAAAGCTGGGAATGATATTTATATACGGATGACACACGGAAAACTAGAA
GCAGCTGTTGCCCCTGGGAAAAGGAAAAGGAAAAGGAAAACGAAAATGAAAACGAAATGG
ATAATATGTGTTTCTTTAACCTCAATGCTGGCACTTCTTATCTTCTCTCTACATAATCAG
GTCCGGCGTCATGCAACAAAGACAGATGTGCTAGATGAACCAGAGATTAATCAGCCTGGA
AACTCTGTAGAAGCTTTGCTGCAGGGCGCAGATGTCATTGCATATGATTACAGTGCTCTA
TCTGCAGCCACTAACAATTTCTCGCTGTCTAATAAGATAGGTCATGGTGGCTTTGGCAAT
GTTTATAAGGGTGTATTAGATACTGGAGAAGAAATAGCAGTGAAGAAGCAGGAAGTGACT
TCACGTCAAGAACGAGGAGATAAGGAGTTTGAGAATGAAGTCAAATTAATAGCAAAGCTT
CAGCATCGTAACCTAACCAAGTTATTGGGATACTGCATTCATGGAAACGAAAAGTTCCTG
GTCTATGAGTTCATGGCCAATAATAGCCTCGACAAGGTCATATTTGATTCTGCAAGAAGG
GGTAAGGTAACATGGTCAATGCGCTTCAACATTATCAAAGGAATTGCAAAAGGATTAGTT
TACTTGCATCATGATTCAAGGTTGACAATAATCCACCGAGACTTAAAAGCTAGCAATGTC
TTGCTAGACAGAGAGATGACACCCAAAATATCTGACTTTGGGTTGTCAAGGGCTTTTGAA
GATGATGTTGAAGAAAAGACTCAGTATGTAGTTGGAACACGTGGTTATATGCCACCTGAA
TACTTAGAAGATGGACATTATTCAACAAAATCAGATGTGTTTAGCTTTGGAATTTTGGCA
TTGGAGATTGTCAGTGGCCAAAAGAATTGGGGTTATCAGCACCCAGTCCATGATATTGGT
CTAGTAGGCTATGCTTGGAAAATTTGGAATGAAGGGAAGGCCGTAGAACTACTGGATCCA
ATGATAGAACAATCAGGCGATGGGAATGAAGTTTTACAATGCATCCTTGTTGGGCTTTTG
TGTTGTCAGCGACGTGTCCAAGACAGACCTTCAATGGTTCAGGTGGTTTCCATACTAGAA
CAGAATGAAACGTCAAGGTTAAATTGTGTGCCCGTGGAACCTTACATCCCTAGAGAGTGG
AGTAACAGTTCCAGGAGCCGCAACAGTGTGAATGGGGTAACTATTACTGAACTCACCGGA
AGATCATGA

Peptide Sequence

PEP ID

XP_016497193.1
PEP Infomation

PREDICTED: receptor-like serine/threonine-protein kinase SD1-8 isoform X3 [Nicotiana tabacum]
Sequence

MDGETLVSSNQRFEMGFFGSTTPFRHTRYLGLWYKGIESGIVWVGNRLNPLGHGARLVFD
VQGFIFLQDDTGKKVPIYTPKQIVLLPVLQLLDAEMKLGWDPKTGLNRAMNSWRTSDDPA
PGEYFFRLESGESGQSLQLVLEKKQQRASRWGPWDGQIFSGGDALVDELVLRPVFNSKTG
AFYVTFEAKNDSRLKLSLNPEGKIQFLKWTNATGWIQVKVLNKDICDNYRTCGPYGVCFV
ENPSCRCPDGFTATSPDDWDKMDYTNGCRRMTPLNYTDKDMFVKNTGLKLPDNATYWGML
SPEECGEKCLNERSCMAYTIININGNVSKCFVWLGDLLDMRHSEKAGNDIYIRMTHGKLE
AAVAPGKRKRKRKTKMKTKWIICVSLTSMLALLIFSLHNQVRRHATKTDVLDEPEINQPG
NSVEALLQGADVIAYDYSALSAATNNFSLSNKIGHGGFGNVYKGVLDTGEEIAVKKQEVT
SRQERGDKEFENEVKLIAKLQHRNLTKLLGYCIHGNEKFLVYEFMANNSLDKVIFDSARR
GKVTWSMRFNIIKGIAKGLVYLHHDSRLTIIHRDLKASNVLLDREMTPKISDFGLSRAFE
DDVEEKTQYVVGTRGYMPPEYLEDGHYSTKSDVFSFGILALEIVSGQKNWGYQHPVHDIG
LVGYAWKIWNEGKAVELLDPMIEQSGDGNEVLQCILVGLLCCQRRVQDRPSMVQVVSILE
QNETSRLNCVPVEPYIPREWSNSSRSRNSVNGVTITELTGRS

Transcript Sequence

Gene sequence data has not been registered.